minor changes

1 files changed, 640 insertions, 2 deletions

diff --git a/compile_commands.json b/compile_commands.json
index 3e7cc3c..82823e4 100644
--- a/compile_commands.json
+++ b/compile_commands.json
@@ -8,8 +8,556 @@
             "-fno-strict-aliasing",
             "-fwrapv",
             "-fms-extensions",
-            "-isystem",
-            "include/vendor/libc",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/blas1.o",
+            "sys/libmath/blas1.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/blas1.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/random.o",
+            "sys/libn/random.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/random.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/test.o",
+            "sys/libbio/test.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/test.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/simulate.o",
+            "sys/libbio/simulate.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/simulate.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/os.o",
+            "sys/libn/os.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/os.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/mmap.o",
+            "sys/libn/mmap.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/mmap.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/error.o",
+            "sys/libn/error.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/error.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-I/usr/include/freetype2",
+            "-I/usr/include/libpng16",
+            "-I/usr/include/harfbuzz",
+            "-I/usr/include/glib-2.0",
+            "-I/usr/lib/glib-2.0/include",
+            "-I/usr/include/freetype2",
+            "-I/usr/include/libpng16",
+            "-I/usr/include/harfbuzz",
+            "-I/usr/include/glib-2.0",
+            "-I/usr/lib/glib-2.0/include",
+            "-o",
+            "build/cmd/term/x.o",
+            "sys/cmd/term/x.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/term/x.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/cmd/cc/lex.o",
+            "sys/cmd/cc/lex.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/cc/lex.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/io.o",
+            "sys/libn/io.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/io.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-D_GNU_SOURCE",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/test.o",
+            "sys/libmath/test.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/test.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/flate.o",
+            "sys/libn/flate.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/flate.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/test.o",
+            "sys/libn/test.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/test.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/cmd/cc/bits.o",
+            "sys/cmd/cc/bits.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/cc/bits.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/gz.o",
+            "sys/libn/gz.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/gz.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/cmd/cc/pp.o",
+            "sys/cmd/cc/pp.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/cc/pp.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-ffreestanding",
+            "-fno-builtin",
+            "-nostdlib",
+            "-I",
+            "include",
+            "-o",
+            "build/libc/stdio.o",
+            "sys/libc/stdio.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libc/stdio.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/io/newick.o",
+            "sys/libbio/io/newick.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/io/newick.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/memory.o",
+            "sys/libn/memory.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/memory.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-ffreestanding",
+            "-fno-builtin",
+            "-nostdlib",
+            "-I",
+            "include",
+            "-o",
+            "build/libc/string.o",
+            "sys/libc/string.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libc/string.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-I/usr/include/freetype2",
+            "-I/usr/include/libpng16",
+            "-I/usr/include/harfbuzz",
+            "-I/usr/include/glib-2.0",
+            "-I/usr/lib/glib-2.0/include",
+            "-I/usr/include/freetype2",
+            "-I/usr/include/libpng16",
+            "-I/usr/include/harfbuzz",
+            "-I/usr/include/glib-2.0",
+            "-I/usr/lib/glib-2.0/include",
+            "-o",
+            "build/cmd/term/term.o",
+            "sys/cmd/term/term.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/term/term.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/blas3.o",
+            "sys/libmath/blas3.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/blas3.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/phylo.o",
+            "sys/libbio/phylo.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/phylo.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/io/fasta.o",
+            "sys/libbio/io/fasta.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/io/fasta.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/blas2.o",
+            "sys/libmath/blas2.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/blas2.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/coro.o",
+            "sys/libn/coro.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/coro.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-D_GNU_SOURCE",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/blas.o",
+            "sys/libmath/blas.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/blas.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/cmd/cc/cc.o",
+            "sys/cmd/cc/cc.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/cc/cc.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/sort.o",
+            "sys/libn/sort.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/sort.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
             "-I",
             "include",
             "-o",
@@ -18,5 +566,95 @@
         ],
         "directory": "/home/nolln/root",
         "file": "sys/cmd/cc/ast.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/bufio.o",
+            "sys/libn/bufio.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/bufio.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libmath/basic.o",
+            "sys/libmath/basic.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libmath/basic.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libn/string.o",
+            "sys/libn/string.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libn/string.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/cmd/cat/cat.o",
+            "sys/cmd/cat/cat.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/cmd/cat/cat.c"
+    },
+    {
+        "arguments": [
+            "gcc",
+            "-c",
+            "-g",
+            "-march=native",
+            "-fno-strict-aliasing",
+            "-fwrapv",
+            "-fms-extensions",
+            "-I",
+            "include",
+            "-o",
+            "build/libbio/align.o",
+            "sys/libbio/align.c"
+        ],
+        "directory": "/home/nolln/root",
+        "file": "sys/libbio/align.c"
     }
 ]
\ No newline at end of file