diff options
| author | Nicholas Noll <nbnoll@eml.cc> | 2020-04-28 14:41:33 -0700 |
|---|---|---|
| committer | Nicholas Noll <nbnoll@eml.cc> | 2020-04-28 14:41:33 -0700 |
| commit | 9fd30c9e0ec9c5716b8cb7b8896318178d4b08bd (patch) | |
| tree | 0815cd9deb346cf729834566275446c3d2d8b40b /include | |
| parent | 4a03c700d5391e3fa18f9d9b219936ef5c9eb722 (diff) | |
fix: ladderize now sorts by number of nodes contained below
Diffstat (limited to 'include')
| -rw-r--r-- | include/libbio.h | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/include/libbio.h b/include/libbio.h index 261c732..9ce96b5 100644 --- a/include/libbio.h +++ b/include/libbio.h @@ -9,8 +9,8 @@ typedef struct bio·Node string comment; double dist; double support; + int nnode; int nchild; - int ndescendent; struct bio·Node *parent; struct bio·Node *sibling; struct bio·Node *child; @@ -25,10 +25,13 @@ typedef struct bio·Tree // clade functions error phylo·addchild(bio·Node* parent, bio·Node* child); +error phylo·rmchild(bio·Node* parent, bio·Node* child); error phylo·countnodes(bio·Node *node, int *n); error phylo·countleafs(bio·Node *node, int *n); +error phylo·ladderize(bio·Node *root); + /* newick i/o */ error bio·readnewick(io·Peeker stream, void*, mem·Allocator heap, void*, bio·Tree* tree); error bio·writenewick(bio·Tree tree, io·Putter out, void*); |