fix: remove profiling code

1 files changed, 3 insertions, 5 deletions

diff --git a/pangraph/build.py b/pangraph/build.py
index 14f96d3..4d1a77f 100644
--- a/pangraph/build.py
+++ b/pangraph/build.py
@@ -71,12 +71,10 @@ def main(args):
     mkdir(tmp)
 
     log("aligning")
-    with cProfile.Profile() as pr:
-        T.align(tmp, args.len, args.mu, args.beta, args.extensive, args.statistics)
-        # TODO: when debugging phase is done, remove tmp directory
+    T.align(tmp, args.len, args.mu, args.beta, args.extensive, args.statistics)
+    # TODO: when debugging phase is done, remove tmp directory
 
-        graphs = T.collect()
-    pr.dump_stats("perf.prof")
+    graphs = T.collect()
 
     for i, g in enumerate(graphs):
         log(f"graph {i}: nseqs: {len(g.seqs)} nblks: {len(g.blks)}")