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| author | Nicholas Noll <nbnoll@eml.cc> | 2020-08-20 13:34:44 -0700 |
|---|---|---|
| committer | Nicholas Noll <nbnoll@eml.cc> | 2020-08-20 13:34:44 -0700 |
| commit | 7e711b0d4693b301f7877d570198843238f90960 (patch) | |
| tree | 795e31a02903e6991b1af5f662922ca1e59df71c | |
| parent | 70e85b88c3038ad707d1e7a149be3b502c58f868 (diff) | |
fix: harmonize log file syntax
| -rw-r--r-- | pangraph/graph.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/pangraph/graph.py b/pangraph/graph.py index 235ef31..500df82 100644 --- a/pangraph/graph.py +++ b/pangraph/graph.py @@ -524,7 +524,7 @@ class Graph(object): shell=True) out, err = proc.communicate() tree = Phylo.read(io.StringIO(out.decode('utf-8')), format='newick') - print(f"-> {n} SCORE={tree.total_branch_length()/(2*num_seqs)}", end=";") + print(f"{n} SCORE={tree.total_branch_length()/(2*num_seqs)}", end=";") make_tree(0) make_tree(1) |