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-rw-r--r--src/SeqSpace.jl25
1 files changed, 23 insertions, 2 deletions
diff --git a/src/SeqSpace.jl b/src/SeqSpace.jl
index 298f4c4..ccb92f4 100644
--- a/src/SeqSpace.jl
+++ b/src/SeqSpace.jl
@@ -158,7 +158,7 @@ end
Deserialize a trained autoencoder from binary format to semantic format.
Represents model as a collection of functors.
"""
-function unmarshal(r::Result)
+function unmarshal(r)
autoencoder = model(r.model.size, r.param.dₒ;
Ws = r.param.Ws,
normalizes = r.param.BN,
@@ -187,7 +187,22 @@ function unmarshal(r::Result)
end
end
- return Result(r.param, r.loss, autoencoder)
+ param = HyperParams(;
+ dₒ = r.param.dₒ,
+ Ws = r.param.Ws,
+ BN = r.param.BN,
+ DO = r.param.DO,
+ N = r.param.N,
+ δ = r.param.δ,
+ η = r.param.η,
+ B = r.param.B,
+ V = r.param.V,
+ k = r.param.k,
+ γₓ = r.param.γₓ,
+ γᵤ = r.param.γᵤ,
+ )
+
+ return Result(param, r.loss, autoencoder)
end
# ------------------------------------------------------------------------
@@ -266,6 +281,10 @@ function buildloss(model, D², param)
Dz² = param.g(z)
Dx² = D²[i,i]
+ dx, dz = PointCloud.upper_tri(Dx²), PointCloud.upper_tri(Dz²)
+ rx, rz = softrank(dx ./ mean(dx)), softrank(dz ./ mean(dz))
+ ϵₓ = 1 - cor(1 .- rx, 1 .- rz)
+ #=
ϵₓ = mean(
let
dx, dz = Dx²[:,j], Dz²[:,j]
@@ -273,6 +292,7 @@ function buildloss(model, D², param)
1 - cor((1 .- rx).^2, (1 .- rz).^2)
end for j ∈ 1:size(Dx²,2)
)
+ =#
ϵᵤ = mean(
let
@@ -280,6 +300,7 @@ function buildloss(model, D², param)
mean( ( (2*i/length(zₛ)-1) - s)^2 for (i,s) in enumerate(zₛ) )
end for d ∈ 1:size(z,1)
)
+
#=
ϵᵤ = let
a = Voronoi.volumes(z)