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scRNAseq analysis framework
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Author
2022-03-01
feat: prototype of autoencoder section done
HEAD
master
Nicholas
2022-03-01
feat: empirical manifold learning
Nicholas
2022-03-01
feat: updated code
Nicholas Noll
2022-02-24
chore: update skeleton of autoencoder.md
Nicholas
2022-02-24
feat: normalization schema detailed in documentation
Nicholas
2022-02-24
feat: documentation for inference
Nicholas
2022-02-23
Feat: added skeleton for paper
Nicholas
2022-02-23
chore: capitalization in readme
Nicholas
2022-02-23
Chore: pangraph -> seqspace
Nicholas
2022-02-23
Chore: added license
Nicholas
2022-02-23
Feat: added README
Nicholas
2022-02-23
Feat: documentation updated
Nicholas
2022-02-23
Chore: documentation
Nicholas Noll
2022-02-17
Feat: update
Nicholas
2022-02-16
Fix: small changes
Nicholas Noll
2022-02-16
Sketching out final pipeline with figure generation
Nicholas Noll
2022-02-15
Feat: checkin
Nicholas Noll
2022-02-15
Feat: update
Nicholas
2022-01-05
docs: fleshed out inference description
Nicholas Noll
2021-12-06
Feat: documentation
Nicholas
2021-09-27
Fix: fitmodel bad access
Nicholas Noll
2021-09-27
Fix: Pipeline prototype now works end to end
Nicholas Noll
2021-09-27
Feat: allow for multiple parameter sets
Nicholas Noll
2021-09-27
feat: updated validation size computation to be more user-friendly
Nicholas Noll
2021-09-27
Feat(pipeline): finished prototypes
Nicholas Noll
2021-09-21
feat: added fitmodel code prototype
Nicholas Noll
2021-09-21
chore: removed old standard of running files
Nicholas Noll
2021-09-21
chore: forgot files
Nicholas Noll
2021-09-21
Makefile framework for data reproducibility
Nicholas Noll
2021-09-20
Perf: improved training loop
Nicholas Noll
2021-09-20
Feat: generalized delaunay to arbitrary dimension
Nicholas Noll
2021-09-15
chore: updated default dimensionality to 2
Nicholas Noll
2021-09-15
chore: rm deprecated NO_FIELDS
Nicholas Noll
2021-09-15
chore: added project.toml
Nicholas Noll
2021-09-14
feat(loss): switched from specifying transformation to latent metric space in...
Nicholas Noll
2021-09-14
fix: reverted method to compute euclidean distance
Nicholas Noll
2021-09-14
fix: projection scoping
Nicholas Noll
2021-09-14
feat: change scope to local
Nicholas Noll
2021-09-14
feat: added high dimensional L2 penalization. removed gpu
Nicholas Noll
2021-09-14
feat(infer): added custom database location
Nicholas Noll
2021-09-14
fix(typo): loss function
Nicholas Noll
2021-09-14
fix(preproc): corrected linear projection
Nicholas Noll
2021-09-14
feat(loss): allow for latent space transformation
Nicholas Noll
2021-09-14
fix(name): collision of loss components
Nicholas Noll
2021-09-14
fix(import): explictly import needed statistics functions
Nicholas Noll
2021-09-14
fix(var): removed deprecated variable
Nicholas Noll
2021-09-14
fix(syntax): explicitly imported linear algebra functions
Nicholas Noll
2021-09-14
fix(typo): syntax ambiguity
Nicholas Noll
2021-09-13
fix: stub out gpu
Nicholas Noll
2021-09-13
fix: update subscript
Nicholas Noll
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